publications

publications by categories in reversed chronological order. generated by jekyll-scholar.

2024

  1. Investigating alignment-free machine learning methods for HIV-1 subtype classification
    Kaitlyn E Wade, Lianghong Chen, Chutong Deng, Gen Zhou, and Pingzhao Hu
    Bioinformatics Advances, 2024
  2. Pro portional Assist Ventilation for Mini mizing the Duration of Mechanical Ventilation (the PROMIZING study): update to the statistical analysis plan for a randomized controlled trial
    Karen J Bosma, Myriam Lafreniere-Roula, Arlene Jiang, Anna Heath, Yongdong Ouyang, Kaitlyn Wade, Pingzhao Hu, Karen EA Burns, Claudio M Martin, Yoanna Skrobik, and others
    Trials, 2024

2023

  1. HexSE: Simulating evolution in overlapping reading frames
    Laura Muñoz-Baena, Kaitlyn E Wade, and Art FY Poon
    Virus Evolution, 2023

2022

  1. Revisiting the recombinant history of HIV-1 group M with dynamic network community detection
    Abayomi S Olabode, Garway T Ng, Kaitlyn E Wade, Mikhail Salnikov, Heather E Grant, David W Dick, and Art FY Poon
    Proceedings of the National Academy of Sciences, 2022

2021

  1. CoVizu: Rapid analysis and visualization of the global diversity of SARS-CoV-2 genomes
    Roux-Cil Ferreira, Emmanuel Wong, Gopi Gugan, Kaitlyn Wade, Molly Liu, Laura Muñoz Baena, Connor Chato, Bonnie Lu, Abayomi S Olabode, and Art FY Poon
    Virus Evolution, 2021